Now this is a bit embarrassing when I had done the jumping puzzle first time and got into the tower I was all of a sudden kicked out without realizing it and reported it thinking it was a bug asking if by any chance i could get the loot or do it a second time.
But, when I did do it a second time and got in I realized that perhaps I had accidentally hit the button to interact with the door as I zoned into the top of the clock tower. So just as a suggestion maybe move the door further away form the spot where the player spawns to avoid that situation. :P