Guild Wars 2

My friend and I are running our personal story together, her on her first character and me on my second, so I’ve already done the whole story. So having done it already I explained the importance of her choice in “A Light in the Darkness” and we decided since I had already done the “making another suffer” quest line and she didn’t like the sound of it, that we would do “letting an innocent die”. Except that the story we were given once we finished “Forging the Pact” was “Striking Off the Chains” which is the “making another suffer” storyline. We’ve progressed through to “The Battle of Fort Trinity” after shrugging off the error (maybe we hit the wrong choice right?) and when speaking to Trahearne we are greeted with the conversation he has with you if you’ve been doing the “letting an innocent die” storyline. So obviously at least a small part of the game realizes that we chose that path but we were never actually given the proper quests. I doubt our stories can be fixed but perhaps it can be looked into so that it doesn’t happen to others?
UPDATE: After “the Battle of Fort Trinity” we were given the quest that finishes the “letting an innocent die” storyline instead of “Liberating Apatia” from the “making another suffer” storyline.